Package: flocker Title: Flexible Occupancy Estimation with Stan Version: 1.1-1 Authors@R: c( person("Jacob B.", "Socolar", , "jacob.socolar@gmail.com", role = c("aut", "cre", "cph")), person("Simon C.", "Mills", role = "aut"), person("Paul-Christian", "Bürkner", role = "ctb") ) Description: Fit occupancy models in 'Stan' via 'brms'. The full variety of 'brms' formula-based effects structures are available to use in multiple classes of occupancy model, including single-season models, models with data augmentation for never-observed species, dynamic (multiseason) models with explicit colonization and extinction processes, and dynamic models with autologistic occupancy dynamics. Formulas can be specified for all relevant distributional terms, including detection and one or more of occupancy, colonization, extinction, and autologistic depending on the model type. Several important forms of model post-processing are provided. References: Bürkner (2017) ; Carpenter et al. (2017) ; Socolar & Mills (2023) . License: BSD_3_clause + file LICENSE URL: https://github.com/jsocolar/flocker, https://jsocolar.github.io/flocker/ BugReports: https://github.com/jsocolar/flocker/issues Depends: R (>= 4.1.0) Imports: abind, assertthat, boot, brms (>= 2.20.3), loo (>= 2.0.0), MASS, matrixStats, stats, utils, withr Suggests: BH (>= 1.75.0-0), knitr, RcppEigen (>= 0.3.3.9.3), rmarkdown, rstan (>= 2.26.0), spelling, testthat (>= 2.1.0), tibble VignetteBuilder: knitr Encoding: UTF-8 LazyData: true LazyDataCompression: xz RoxygenNote: 7.3.3 Language: en-US Config/pak/sysreqs: cmake make libicu-dev Repository: https://jsocolar.r-universe.dev Date/Publication: 2026-10-16 21:31:45 UTC RemoteUrl: https://github.com/jsocolar/flocker RemoteRef: HEAD RemoteSha: 796d3f7b58d3393e6d06b3de20732d30e1a6d96d NeedsCompilation: no Packaged: 2026-10-16 23:48:56 UTC; root Author: Jacob B. Socolar [aut, cre, cph], Simon C. Mills [aut], Paul-Christian Bürkner [ctb] Maintainer: Jacob B. Socolar